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1

CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data

duVerle, David A., Yotsukura, Sohiya, Nomura, Seitaro, Aburatani, Hiroyuki, Tsuda, Koji

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 5.01 MB

english, 2016

2

A review of statistical methods for prediction of proteolytic cleavage

duVerle, D. A., Mamitsuka, H.

Journal:

Briefings in Bioinformatics

Year:

2012

Language:

english

File:

PDF, 525 KB

english, 2012

3

[ACM Press the 13th Workshop - Scottsdale, Arizona, USA (2014.11.03-2014.11.03)] Proceedings of the 13th Workshop on Privacy in the Electronic Society - WPES '14 - Oblivious Evaluation of Non-deterministic Finite Automata with Application to Privacy-Preserving Virus Genome Detection

Sasakawa, Hirohito, Harada, Hiroki, duVerle, David, Arimura, Hiroki, Tsuda, Koji, Sakuma, Jun

Year:

2014

Language:

english

File:

PDF, 527 KB

english, 2014

4

[IEEE 2015 IEEE Security and Privacy Workshops (SPW) - San Jose, CA, USA (2015.5.21-2015.5.22)] 2015 IEEE Security and Privacy Workshops - Privacy-Preserving Statistical Analysis by Exact Logistic Regression

Duverle, David A., Kawasaki, Shohei, Yamada, Yoshiji, Sakuma, Jun, Tsuda, Koji

Year:

2015

Language:

english

File:

PDF, 669 KB

english, 2015

5

Discovering combinatorial interactions in survival data

duVerle, D. A., Takeuchi, I., Murakami-Tonami, Y., Kadomatsu, K., Tsuda, K.

Journal:

Year:

2013

Language:

english

File:

PDF, 300 KB

english, 2013

6

Machine Learning Sequence Classification Techniques: Application to Cysteine Protease Cleavage Prediction

A. duVerle, David, Mamitsuka, Hiroshi

Journal:

Current Bioinformatics

Year:

2012

Language:

english

File:

PDF, 294 KB

english, 2012

7

Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array

Shinkai-Ouchi, Fumiko, Koyama, Suguru, Ono, Yasuko, Hata, Shoji, Ojima, Koichi, Shindo, Mayumi, duVerle, David, Ueno, Mika, Kitamura, Fujiko, Doi, Naoko, Takigawa, Ichigaku, Mamitsuka, Hiroshi, Sorima

Journal:

Molecular & Cellular Proteomics

Year:

2016

Language:

english

File:

PDF, 5.18 MB

english, 2016

8

Computational recognition for long non-coding RNA (lncRNA): Software and databases

Yotsukura, Sohiya, duVerle, David, Hancock, Timothy, Natsume-Kitatani, Yayoi, Mamitsuka, Hiroshi

Journal:

Briefings in Bioinformatics

Year:

2016

Language:

english

File:

PDF, 663 KB

english, 2016

9

[IMPERIAL COLLEGE PRESS Proceedings of the 9th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009) - Boston University, Boston, USA (27 – 29 July 2009)] Genome Informatics 2009 - CaMPDB: A RESOURCE FOR CALPAIN AND MODULATORY PROTEOLYSIS

duVERLE, DAVID, TAKIGAWA, ICHIGAKU, ONO, YASUKO, SORIMACHI, HIROYUKI, MAMITSUKA, HIROSHI

Language:

english

File:

PDF, 1.78 MB

english

10

Calpain Cleavage Prediction Using Multiple Kernel Learning

duVerle, David A., Ono, Yasuko, Sorimachi, Hiroyuki, Mamitsuka, Hiroshi, Schönbach, Christian

Journal:

Year:

2011

Language:

english

File:

PDF, 482 KB

english, 2011

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